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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015886926.1_cds_XP_016441099.1_36493
CDS Infomation

[gene=LOC107766769] [db_xref=GeneID:107766769] [protein=probable LRR receptor-like serine/threonine-protein kinase At2g16250 isoform X1] [protein_id=XP_016441099.1] [location=join(27326..29247,29388..29513,30004..30026,30113..30717)] [gbkey=CDS]
Sequence

ATGGGAACCCAGTTCAAGGCTGCTCTTTTTCTCTTGTTCTTTTACTCAGTGTTAGCTAAG
CAGAACCAACTGAGTTCCAACTTGGAACATCAAGATTTGCTGAATCTCAGGTCATCTTTG
GGCATCAGAGCTAGAGATTGGCCAAGAAAATCAGACCCCTGCTCCAATTGGACTGGAATT
GGCTGCACCAATGGCAAAGTTACAAGTATAAAGTTAACTGGACTAAGAAGAAGTCACAAA
GGAAGTTTGTTTCCACAGTTTGCTGTTGATTCTTTGGCCAATTTTACTCAGTTGACATCC
TTTAACTCATCAGGTTTCATTCTCCTCGGTCCAATTCCAGATTGGTTTGGTCAAAGATTA
ACTCAGCTCAAAGAACTTGATCTTAGTTCAAGCTCAATTCTCGGTTCACTTCCACCTTCA
CTTGGAAGTTTAAGTAAACTTAATTCTCTATCTTTGTCTAGTAATTCAATTACAGGTACT
ATTCCTACAGAATTTGGGAAGTTAAGTTCTTTAAAGGTTCTTAATCTTTCTGGTAATTCA
CTCACAGGTTCAATTCCAAGTTCTTTTTCAGATATTGAGAATCTCACTGTTCTTGATTTG
TCTTCAAATTTGTTGTCTGGTCCAATCCCTATTGAATTTGGTTCATTTCATGGCCTTAAG
TTTCTCAACTTATCCAATAATAGTCTGAGTTCTTATATTCCTGCTCAGCTAGCAAATCTT
TCTCAATTAGTAGAACTTGATCTTGGCTACAATTACTTGTCAGGGTCATTGTCAGAAGAT
TTATCAAGATTGAGAAATTTAAGGAAATTGTTAATTGGAAATAATGAACTAGAGGGTGCA
TTGCCTGGTACCTTGTTTTCAAATCTTTCTCAACTGGAGTATATAGTTCTCAGTTGGAAT
CGATTCGCAGGCGAAATTCCTGATGTTTTGTGGTCATTGTCCCACTTTAGGATTCTTGAT
ATTTCAGGGAACAACTTCACTGGTGTGGTTTCAAATGTTACCTTATTTAGTGCCAATAGT
GCTTCATATAACCTTTCAAATAATCTCTTCTTTGGAAATGTGACATTTGTTGTTCAGAAT
TTTCAATCAATTGATCTGTCCAACAACTATTTTCAAGGATTAGCACCAACTATTTCTGGC
ATTCAAGTTATGAGTAATTGCTTTACAGGGTCTTTGAATCAGAGGAGTTCAGAAGATTGT
CGTAAATTTTATGCTGATAGGGGTCTAGTTTTTGTCAATGGCGGCACCAATGGCACAAGC
CAAACTCCAGCAGAAAGACCTTCAAAGAGAGGGCATACGCGCCTTCTTATAATGGTTGGA
GTTTTTGGTGGGCTTGGGGTTCTTATGCTTTTGGCATTAGCCATTCTATTGTTTTTGAAG
ATATGCTACAGAGGAAATTCAAATGAAAGATGCAATTCGAACGTTAGTCCTGTCGTGGAA
GGAGATAATCAGGCACCTGTGAAGTTCTCTAGTGAAATATCTGGTTCGGTCGAATCATTT
ACTTATGAACAGATACTCCAATCCACAAGCAACTTCAATGAAACAAACCTTATCAAGCAC
GGTTACACTGGAGACATTTTCCGGGGAATATTGGAAGGCGTTGTTCCCATAGTTATCAAG
AAAGTTAGTTTACTTCAGTCTGAAAAAGAATCATACAAGTTGGAGTTGGATTTGTTAAAC
TGGATAACACACCATAGGTTTGTCCCTTTATTGGGCCACTGCTTAGAGCCTGAGAATGAG
AAATTCTTGGTCTACAAATATATGCGCAATGGAGATTTGTTCAGTTTGTTGTCCAGGGAT
AGAGATATAGAAGACGAAAATCGACAGTCTTTGGATTGGATTACAAGATTAAAAATTGCA
ATAGGAACTGCAGAAGGTTTAACTTATTTACACCATGAGTGTAATCCTCCCCTTGTTCAC
AGAGATGTTCAAGCTAGCAGTATCCTTCTCGACGATAGATTTGAAGTAAGGCTGGGAAGT
TTGAGCGAAGTGTGTGCACAGGAAGGTGATAATCACAATTTGATCACAAAGATCTTCCGC
ATGCCAAAGAATCCTGAGGGAGACACTGCTGAATCTTCATTTACAAGTTGCACTTATGAT
GTATACTGTTTCGGGAAGGTCTTACTCGAGCTTGTAACTGGTAAGGTTGGCATAAGCCAG
TCAGATGATGCCTCAACCAAGGAGTGGTTGGACAAATTTCTTCCTTTCATCACTATACGG
GAGAAAGAATTAGTGGCCAACATCGTCGATCCATCTCTAATTCTAGATGAGGACTTACTG
GAAGAGATGTGGGCTGTAGCTATAGTAGCCAAAGCATGTCTTCATCCGAGGCCTTCCAAA
CGTCCTGAAATGAGACGCGTCCTAAAAGCACTAGAGAACCCTTTCAAGGTTGTTAGGGAA
GGAAGTTTCAACTCTACAAGGCTACAGACAACTTCATTGAGGCGATCGTGGAGTGCTGCT
TTTCTTGGTAGTTGGCACCATAGCTCTCAAGATAGTTTAAATGCCAGTGGCCAAACAAGC
AAAGAGGGTATGAACTACCTAAAACAGTCAGGACGAGTAGGATCTCATTCTCATAGCAGT
GGGAATGAGCATTCATCGTCGTGTAAGAGATCATCCAGTGAGATTTTCCCCGAACCTCAG
GAAACACTAGATATAGAAAGACAGGACATGAACTAG

Peptide Sequence

PEP ID

XP_016441099.1
PEP Infomation

PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At2g16250 isoform X1 [Nicotiana tabacum]
Sequence

MGTQFKAALFLLFFYSVLAKQNQLSSNLEHQDLLNLRSSLGIRARDWPRKSDPCSNWTGI
GCTNGKVTSIKLTGLRRSHKGSLFPQFAVDSLANFTQLTSFNSSGFILLGPIPDWFGQRL
TQLKELDLSSSSILGSLPPSLGSLSKLNSLSLSSNSITGTIPTEFGKLSSLKVLNLSGNS
LTGSIPSSFSDIENLTVLDLSSNLLSGPIPIEFGSFHGLKFLNLSNNSLSSYIPAQLANL
SQLVELDLGYNYLSGSLSEDLSRLRNLRKLLIGNNELEGALPGTLFSNLSQLEYIVLSWN
RFAGEIPDVLWSLSHFRILDISGNNFTGVVSNVTLFSANSASYNLSNNLFFGNVTFVVQN
FQSIDLSNNYFQGLAPTISGIQVMSNCFTGSLNQRSSEDCRKFYADRGLVFVNGGTNGTS
QTPAERPSKRGHTRLLIMVGVFGGLGVLMLLALAILLFLKICYRGNSNERCNSNVSPVVE
GDNQAPVKFSSEISGSVESFTYEQILQSTSNFNETNLIKHGYTGDIFRGILEGVVPIVIK
KVSLLQSEKESYKLELDLLNWITHHRFVPLLGHCLEPENEKFLVYKYMRNGDLFSLLSRD
RDIEDENRQSLDWITRLKIAIGTAEGLTYLHHECNPPLVHRDVQASSILLDDRFEVRLGS
LSEVCAQEGDNHNLITKIFRMPKNPEGDTAESSFTSCTYDVYCFGKVLLELVTGKVGISQ
SDDASTKEWLDKFLPFITIREKELVANIVDPSLILDEDLLEEMWAVAIVAKACLHPRPSK
RPEMRRVLKALENPFKVVREGSFNSTRLQTTSLRRSWSAAFLGSWHHSSQDSLNASGQTS
KEGMNYLKQSGRVGSHSHSSGNEHSSSCKRSSSEIFPEPQETLDIERQDMN

Transcript Sequence

Gene sequence data has not been registered.